Based on WGCNA and machine learning studies, SMURF2 drives NSCLC malignant transformation, ferroptosis, and macrophage polarization by ubiquitinating SPP1.
OpenAlex 토픽 ·
Ferroptosis and cancer prognosis
Chromatin Remodeling and Cancer
Immune cells in cancer
[BACKGROUND] Non-small cell lung cancer (NSCLC) is a common type of lung cancer with poor prognosis and high mortality in advanced stages.
APA
Junyan Cao, Xiu Yang, et al. (2026). Based on WGCNA and machine learning studies, SMURF2 drives NSCLC malignant transformation, ferroptosis, and macrophage polarization by ubiquitinating SPP1.. Gene, 994, 150093. https://doi.org/10.1016/j.gene.2026.150093
MLA
Junyan Cao, et al.. "Based on WGCNA and machine learning studies, SMURF2 drives NSCLC malignant transformation, ferroptosis, and macrophage polarization by ubiquitinating SPP1.." Gene, vol. 994, 2026, pp. 150093.
PMID
41831581
Abstract
[BACKGROUND] Non-small cell lung cancer (NSCLC) is a common type of lung cancer with poor prognosis and high mortality in advanced stages. Although secreted phosphoprotein 1 (SPP1) is associated with the progression of NSCLC, its specific mechanisms remain to be explored.
[METHODS] Through integrated bioinformatics analysis combining weighted gene co-expression network analysis (WGCNA), differential expression analysis, gene enrichment analysis with the Kyoto Encyclopedia of Genes and Genomes (KEGG)/Gene Ontology (GO), and machine learning techniques incorporating database predictions, core genes were identified. Experimental validation was conducted using Western blot, co-immunoprecipitation (Co-IP), cycloheximide (CHX) chase assay, Ubiquitin Immunoprecipitation (Ub-IP), colony formation, flow cytometry, transwell assay, reactive oxygen species (ROS) detection, and quantitative real-time PCR (qRT-PCR). The functional impact of SPP1 on tumor growth was further confirmed through mouse models and immunohistochemistry (IHC).
[RESULTS] Based on WGCNA and machine learning, SPP1 was identified as a core gene. SMURF2 ubiquitinated and degraded SPP1. Rescue experiments confirmed that SMURF2 inhibited proliferation and invasion, and promoted apoptosis in NSCLC cells, which were reversed by SPP1 overexpression. Furthermore, SMURF2 enhanced ferroptosis and modulated macrophage polarization via the same ubiquitination mechanism. Animal studies verified that SMURF2-mediated ubiquitination and degradation of SPP1 suppressed tumor growth.
[CONCLUSION] This study aims to investigate the role of SMURF2-mediated ubiquitination of SPP1 in inhibiting malignant progression, promoting ferroptosis, and modulating macrophage polarization in NSCLC, thereby providing a theoretical foundation and new insights for understanding and targeting NSCLC.
[METHODS] Through integrated bioinformatics analysis combining weighted gene co-expression network analysis (WGCNA), differential expression analysis, gene enrichment analysis with the Kyoto Encyclopedia of Genes and Genomes (KEGG)/Gene Ontology (GO), and machine learning techniques incorporating database predictions, core genes were identified. Experimental validation was conducted using Western blot, co-immunoprecipitation (Co-IP), cycloheximide (CHX) chase assay, Ubiquitin Immunoprecipitation (Ub-IP), colony formation, flow cytometry, transwell assay, reactive oxygen species (ROS) detection, and quantitative real-time PCR (qRT-PCR). The functional impact of SPP1 on tumor growth was further confirmed through mouse models and immunohistochemistry (IHC).
[RESULTS] Based on WGCNA and machine learning, SPP1 was identified as a core gene. SMURF2 ubiquitinated and degraded SPP1. Rescue experiments confirmed that SMURF2 inhibited proliferation and invasion, and promoted apoptosis in NSCLC cells, which were reversed by SPP1 overexpression. Furthermore, SMURF2 enhanced ferroptosis and modulated macrophage polarization via the same ubiquitination mechanism. Animal studies verified that SMURF2-mediated ubiquitination and degradation of SPP1 suppressed tumor growth.
[CONCLUSION] This study aims to investigate the role of SMURF2-mediated ubiquitination of SPP1 in inhibiting malignant progression, promoting ferroptosis, and modulating macrophage polarization in NSCLC, thereby providing a theoretical foundation and new insights for understanding and targeting NSCLC.
MeSH Terms
Humans; Carcinoma, Non-Small-Cell Lung; Animals; Lung Neoplasms; Mice; Machine Learning; Ubiquitination; Ferroptosis; Ubiquitin-Protein Ligases; Gene Expression Regulation, Neoplastic; Cell Line, Tumor; Macrophages; Cell Transformation, Neoplastic; Gene Regulatory Networks; Cell Proliferation; Computational Biology; Osteopontin
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