PseudoSegRT: efficient pseudo-labelling for intraoperative OCT segmentation.

International journal of computer assisted radiology and surgery 2023 Vol.18(7) p. 1245-1252

Huang Y, Asaria R, Stoyanov D, Sarunic M, Bano S

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Abstract

[PURPOSE] Robotic ophthalmic microsurgery has significant potential to help improve the success of challenging procedures and overcome the physical limitations of the surgeon. Intraoperative optical coherence tomography (iOCT) has been reported for the visualisation of ophthalmic surgical manoeuvres, where deep learning methods can be used for real-time tissue segmentation and surgical tool tracking. However, many of these methods rely heavily on labelled datasets, where producing annotated segmentation datasets is a time-consuming and tedious task.

[METHODS] To address this challenge, we propose a robust and efficient semi-supervised method for boundary segmentation in retinal OCT to guide a robotic surgical system. The proposed method uses U-Net as the base model and implements a pseudo-labelling strategy which combines the labelled data with unlabelled OCT scans during training. After training, the model is optimised and accelerated with the use of TensorRT.

[RESULTS] Compared with fully supervised learning, the pseudo-labelling method can improve the generalisability of the model and show better performance for unseen data from a different distribution using only 2% of labelled training samples. The accelerated GPU inference takes less than 1 millisecond per frame with FP16 precision.

[CONCLUSION] Our approach demonstrates the potential of using pseudo-labelling strategies in real-time OCT segmentation tasks to guide robotic systems. Furthermore, the accelerated GPU inference of our network is highly promising for segmenting OCT images and guiding the position of a surgical tool (e.g. needle) for sub-retinal injections.

추출된 의학 개체 (NER)

유형영어 표현한국어 / 풀이UMLS CUI출처등장
시술 microsurgery 미세수술 dict 1
해부 tissue scispacy 1
합병증 sub-retinal scispacy 1
질환 sub-retinal scispacy 1
질환 samples scispacy 1
기타 retinal scispacy 1
기타 FP16 scispacy 1

MeSH Terms

Humans; Retina; Ophthalmologic Surgical Procedures; Tomography, Optical Coherence; Microsurgery; Image Processing, Computer-Assisted

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