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A self-sensing vacuole/lysosome: V-ATPase dysfunction activates selective autophagy.

Autophagy 2026 p. 1-4

Huang Y, Klionsky DJ

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Macroautophagy/autophagy has long been viewed as being strictly dependent on vacuolar or lysosomal acidity, with the vacuolar-type H-translocating ATPase (V-ATPase) functioning mainly as a proton pump

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APA Huang Y, Klionsky DJ (2026). A self-sensing vacuole/lysosome: V-ATPase dysfunction activates selective autophagy.. Autophagy, 1-4. https://doi.org/10.1080/15548627.2025.2604345
MLA Huang Y, et al.. "A self-sensing vacuole/lysosome: V-ATPase dysfunction activates selective autophagy.." Autophagy, 2026, pp. 1-4.
PMID 41414751

Abstract

Macroautophagy/autophagy has long been viewed as being strictly dependent on vacuolar or lysosomal acidity, with the vacuolar-type H-translocating ATPase (V-ATPase) functioning mainly as a proton pump that sustains degradation. Our recent paper overturns this paradigm, revealing that loss of V-ATPase activity paradoxically induces a selective autophagy program in nutrient-replete . Vacuolar deacidification triggers a signaling cascade through the Gcn2-Gcn4/ATF4 integrated stress response, which drives Atg11-dependent ribophagy even when TORC1 remains active. This "V-ATPase-dependent autophagy" operates as a self-corrective feedback loop: when the vacuole's degradative capacity falters, it signals its own dysfunction to restore homeostasis. Tryptophan and NAD metabolism modulate this response, linking metabolic balance to autophagy induction. This discovery reframes the vacuole/lysosome from a passive endpoint to an active sensor of cellular integrity. It also challenges the use of V-ATPase inhibitors such as bafilomycin A as neutral autophagy flux blockers, because inhibition itself can stimulate autophagy induction. Collectively, these findings position the V-ATPase as a bidirectional regulator - both gatekeeper and sentinel - governing how cells translate organelle stress into adaptive autophagy.: ATG: autophagy related; FL: follicular lymphoma; TORC1: TOR complex 1; V-ATPase: vacuolar-type H-translocating ATPase.

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