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Clamp the LAMP: a photoelectrochemical platform for KRAS mutation detection via wild-type blocking.

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Biosensors & bioelectronics 2026 Vol.304() p. 118617 Advanced biosensing and bioanalysis
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PubMed DOI OpenAlex 마지막 보강 2026-04-28
OpenAlex 토픽 · Advanced biosensing and bioanalysis techniques Biosensors and Analytical Detection Molecular Sensors and Ion Detection

Strmiskova J, Valverde A, Moranova L, Arnouts J, Zavadil-Kokas F, Koljenovic S, Zwaenepoel K, Vandamme T, Bartosik M, De Wael K

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KRAS mutations are among the most prevalent oncogenic alterations in colorectal, lung and pancreatic cancer, yet their detection remains analytically challenging in the presence of an overwhelming wil

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APA J. Strmiskova, A. Valverde, et al. (2026). Clamp the LAMP: a photoelectrochemical platform for KRAS mutation detection via wild-type blocking.. Biosensors & bioelectronics, 304, 118617. https://doi.org/10.1016/j.bios.2026.118617
MLA J. Strmiskova, et al.. "Clamp the LAMP: a photoelectrochemical platform for KRAS mutation detection via wild-type blocking.." Biosensors & bioelectronics, vol. 304, 2026, pp. 118617.
PMID 41855941

Abstract

KRAS mutations are among the most prevalent oncogenic alterations in colorectal, lung and pancreatic cancer, yet their detection remains analytically challenging in the presence of an overwhelming wild-type (WT) background. Here, we report a photoelectrochemical (PEC) genotyping platform that integrates clamp-inhibited loop-mediated isothermal amplification (C-LAMP) with enzyme-free singlet oxygen (O)-driven PEC transduction for mutation-selective KRAS detection. Locked nucleic acid (LNA) clamp probes selectively suppress WT amplification during isothermal amplification, enriching mutant alleles and enabling single-nucleotide variant (SNV) discrimination with high selectivity. Amplified products are magnetically captured and transduced into photocurrent via visible-light-induced O redox cycling, eliminating enzymatic reporters and reducing background interference. The C-LAMP/PEC platform achieves a limit of detection of 35 copies μL (58 aM) and a minimum detectable variant allele frequency (VAF) of 4.8% in heterogeneous mutant/WT genomic DNA mixtures. Analytical performance was validated in cancer cell lines and in patient-derived fresh frozen tissues, showing complete concordance with Nanopore sequencing and droplet digital PCR (ddPCR) within the evaluated cohort (n = 16). This work introduces a robust and modular PEC biosensing strategy that combines molecular WT suppression with enzyme-free photoelectrochemistry, offering an economically competitive and instrumentation-simplified approach for clinically relevant KRAS mutation analysis toward decentralized testing.

MeSH Terms

Humans; Proto-Oncogene Proteins p21(ras); Biosensing Techniques; Electrochemical Techniques; Mutation; Nucleic Acid Amplification Techniques; Limit of Detection; DNA Mutational Analysis; Cell Line, Tumor; Oligonucleotides; Singlet Oxygen; Molecular Diagnostic Techniques