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A Novel Hypoxia-Immune Signature for Gastric Cancer Prognosis and Immunotherapy: Insights from Bulk and Single-Cell RNA-Seq.

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Current issues in molecular biology 📖 저널 OA 92.1% 2022: 1/1 OA 2023: 2/2 OA 2024: 4/4 OA 2025: 64/64 OA 2026: 45/55 OA 2022~2026 2025 Vol.47(7)
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Nguyen MH, Ta HDK, Nguyen DPQ, Le VH, Le NQK

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: Hypoxia and immune components significantly shape the tumor microenvironment and influence prognosis and immunotherapy response in gastric cancer (GC).

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APA Nguyen MH, Ta HDK, et al. (2025). A Novel Hypoxia-Immune Signature for Gastric Cancer Prognosis and Immunotherapy: Insights from Bulk and Single-Cell RNA-Seq.. Current issues in molecular biology, 47(7). https://doi.org/10.3390/cimb47070552
MLA Nguyen MH, et al.. "A Novel Hypoxia-Immune Signature for Gastric Cancer Prognosis and Immunotherapy: Insights from Bulk and Single-Cell RNA-Seq.." Current issues in molecular biology, vol. 47, no. 7, 2025.
PMID 40729021 ↗

Abstract

: Hypoxia and immune components significantly shape the tumor microenvironment and influence prognosis and immunotherapy response in gastric cancer (GC). This study aimed to develop hypoxia- and immune-related gene signatures for prognostic evaluation in GC. : Transcriptomic data from TCGA-STAD were integrated with hypoxia- and immune-related genes from InnateDB and MSigDB. A prognostic gene signature was constructed using Cox regression analyses and validated on an independent GSE84437 cohort and single-cell RNA dataset. We further analyzed immune cell infiltration, molecular characteristics of different risk groups, and their association with immunotherapy response. Single-cell RNA-seq data from the TISCH database were used to explore gene expression patterns across cell types. : Five genes (, , , , ) were identified. The risk score effectively stratified patients by prognosis, with the high-risk group showing lower overall survival and lower T-cell expression. The gene signature had an association with immune suppression, mutation, EMT features, and poorer response to immunotherapy. Gene signature, especially was enriched in fibroblasts. : We developed a robust hypoxia- and immune-related gene signature that predicts prognosis and may help guide immunotherapy strategies for GC patients.

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